YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21227673, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQENKNDKS YYVIIALSVV LVLMAATIYA ISQNEPEKDA ENTISMSGYA EQKVVPDTAT  60
   61 MRIGVVIQAA TAKEASDENA AIMSNIVSEL KAIGLQDREI QTSYVSVYPI YSYDTTQKIT 120
  121 GYAASNSVQI TTTNLDNLSQ IIDRSTAAGA NEIGSISFSV SDDMQKQLRE DLMNEAINDA 180
  181 SSKADTLAKS LGVEITGVKT SSISESNGPR VYYEYDMAVE EKASGAVSTP IEPGESTVSM 240
  241 SVQVTYYIK

Type	Start	End	Confidence
Cytoplasmic	1	10	0.85
Transmembrane Helix	11	31	0.88
Non-Cytoplasmic	32	249	0.98