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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AEE18_ARATH
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWKSIGELSC DDYVKAGLTL EDAKEFDKLV SDVITKAIET DPRDQWKALV DESVLKPWHP  60
   61 HPLHQLLYYS VYSNWDSSVH GPPLYWFPSL SQSKSTNLGK LMEYHGPRLL GPSYKNPLES 120
  121 FELFRRFSVE HPEVYWSFVI DELSLVFHTP PRCILNKSKP EGTWLPDAVL NIAECCLMPS 180
  181 SHPKKEDDSV AVVWRNEGFD DSPVNRMTIK ELREQVMLVA NAISGSFEKG DTIAIDMPMT 240
  241 VDAVIIYLAI ILAGCIVVSI ADSFAAKEIA TRLKISKAKG IFTQDYILRG GRRFPLYSRV 300
  301 VEAAPSKVIV LPASGTELHV QLREQDVSWM DFLSNAKPHS SGENYYRPIY LPVESVINIL 360
  361 FSSGTTGEPK AIPWTQLSPI RSACDGWAHL DVQVGHTYCW PTNLGWVMGP TLMFSCFLTG 420
  421 ATLALYSGSP LGRGFGKFVQ DAGVTVLGTV PSLVKTWKRT NCMEGLNWTK IKFFATTGEA 480
  481 SNVDDVLWLS SKADYKPVIE CCGGTELASS YIIGSPLQPQ AFGAFSTPSM TTRIIIFDEN 540
  541 GVPYPDDQPC TGEVGLFPQH LGATDRLLNA NHDEVYFKGM PMYKETRLRR HGDIVKRTVG 600
  601 GYYNVQGRAD DTMNLGGIKT SSIEIERVCD QADECISETA AVTLTPPNGG PELLVIFAVL 660
  661 KEGFKQQSGE ELKMKFSRTI QKDLNPLFKV SFVKIVPEFP RTASSKLLRR VLRDQIKQEL 720
  721 LSLRSRI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle