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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SAC9_ARATH
Protein type: Transmembrane
Type Confidence: 0.88
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLHPPGGSK KTSVVVVTLD TGEVYVIASL LSKADTQVIY IDPTTGILRY NGKPGLDNFK  60
   61 SEREALDYIT NGSRGGVRSS VYARAILGYA VLGSFGMLLV ATRLNPSIPD LPGGGCVYTV 120
  121 AESQWVKIPL YNPQPQGKGE TKNIQELTEL DIDGKHYFCD TRDITRPFPS RMPLQSPDDE 180
  181 FVWNRWLSVP FKNIGLPEHC VILLQGFAEY RPFGSSGQLE GIVALMARRS RLHPGTRYLA 240
  241 RGINSCSGTG NEVECEQLVW IPKRNGQSIA FNSYIWRRGT IPIWWGAELK MTAAEAEIYV 300
  301 ADRDPYKGST EYYQRLSKRY DTRNLDAPVG ENQKKKAFVP IVCVNLLRSG EGKSECILVQ 360
  361 HFEESMNFIK SSGKLPYTRV HLINYDWHAS VKLKGEQQTI EGLWMYLKSP TMAIGISEGD 420
  421 YLPSRQRLKD CRGEVICIDD IEGAFCLRSH QNGVIRFNCA DSLDRTNAAS FFGGLQVFVE 480
  481 QCRRLGISLD TDLGYGHNSV NNQGGYNAPL PPGWEKRADA VTGKSYYIDH NTKTTTWSHP 540
  541 CPDKPWKRLD MRFEEFKRST ILSPVSELAD LFLQQGDIHA TLYTGSKAMH SQILNIFSEE 600
  601 SGAFKQFSAA QKNMKITLQR RYKNAMVDSS RQKQLEMFLG MRLFKHLPSI PVQPLHVLSR 660
  661 PSGFFLKPVP NMSESSNDGS SLLSIKRKDI TWLCPQAADI VELFIYLSEP CHVCQLLLTI 720
  721 SHGADDLTCP STVDVRTGRH IEDLKLVVEG ASIPRCANGT NLLVPLPGPI SSEDMAVTGA 780
  781 GARLHEKDTS SLSLLYDFEE LEGQLDFLTR VVAVTFYPAG AVRIPMTLGQ IEVLGISLPW 840
  841 KGMFTCERTG GRLAELARKP DEDGSPFSSC SDLNPFAATT SLQAETVSTP VQQKDPFPSN 900
  901 LLDLLTGEDS SSDPFPQPVV ECIASGGNDM LDFLDEAVVE YRGSDTVPDG SVPQNKRPKD 960
  961 SGAHLYLNCL KSLAGPNMAK KLEFVEAMKL EIERLRLNIS AAERDRALLS IGIDPATINP1020
 1021 NSSYDELYIG RLCKIANALA VMGQASLEDK IIASIGLEKL ENNVIDFWNI TRIGEGCDGG1080
 1081 MCQVRAEVNK SPVGSSTKSS RGESGSVFLC FQCMKKACKF CCAGKGALLL SKSYSRDTAN1140
 1141 GGGSLADVSA TSIGSDHYIC KKCCSSIVLE ALIVDYVRVM VSLRRSGRVD NAGREALNEV1200
 1201 FGSNITNHLA VRGQPSPNRE DFNFLRQILG KEESLSEFPF ASFLHKVETA TDSAPFFSLL1260
 1261 TPLNLASSNA YWKAPPSADS VEAAIVLNTL SDVSSVILLV SPCGYSDADA PTVQIWASSD1320
 1321 INKEARTLMG KWDVQSFIRS SPELSGSEKS GRAPRHIKFA FKNPVRCRII WITLRLPRLG1380
 1381 SSSSVSLDKN INLLSLDENP FAPIPRRASF GATIENDPCI HAKHILVTGN TVRDKTLQSV1440
 1441 ESMSVRNWLD RAPRLNRFLI PLETERPMEN DLVLELYLQP ASPLAAGFRL DAFSAIKPRV1500
 1501 THSPSSDVVD IWDPTSVIME DRHVSPAILY IQVSVLQEQY KMVTIAEYRL PEARDGTKLY1560
 1561 FDFPKQIQAQ RVSFKLLGDV AAFTDEPAEA VDLSSRASPF AAGLSLANRI KLYYYADPYE1620
 1621 VGKWTSLSSV 

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