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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SAC7_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.26
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METVDSRNKL HSRLRLWEFP DQYIIEPADG SGSSCLDISR VDASMKLIDQ VPESNSVRVP  60
   61 KIRSIFGVVG MLKLLAGSYL VVVTESERVG SFLGHPIFKV TTLKVLPCDH SLKNSPEEQK 120
  121 KMETEFSKLL SVAEKTTGLY FSYEVNLTLS SQRLHEMGDE SKSLPLWRQA EPRFLWNNYM 180
  181 LEVLIDNKLD QFLLPVIQGS FNSFETAIGR DIVDITLIAR RCTRRNGTRM WRRGADLDGY 240
  241 VANFVETEQI VQMNGYTSSF VQVRGSMPFM WEQVVDLTYK PKFEIVQPEE AKRIAERHFL 300
  301 DLRKKYGSVL AVDLVNKQGG EGRLCEKYAT VMQHITGDDI RYLHFDFHQI CGHIHFERLS 360
  361 ILYEQIEGFL EKNGYFLLNE KGEKMKEQLG VVRSNCIDCL DRTNVTQSMI GRKMLEVQLK 420
  421 RIGVFGAEET ISSHLNFDEH YKILWANHGD EISIQYSGTP ALKGDFVRYG HRTAHGVLKD 480
  481 GWSSLRRYYL NNFADGTKQD AIDLLQGHYI VAVSRDMAPV PQKGGLEAVA NFPVALFVVL 540
  541 MSFWFATMSL KQTGSDYKHK HLFFSLLWTG ICVGMAALVR ANGRIFCNRP RLHKPRG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle