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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SAC6_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSRLKIHSG LRLWEFPDQY VIEPTDGSSA SCLDISRLDG SMKLIDQVAE CNSLRVPKIR  60
   61 SIFGVVGMLK LLAGSYLVVV TESESVGSFL GHPIYKINSL KFLPCDHSLE NPHEEQKKME 120
  121 TDDYSRLLSV AERTTGLYFS YEINLTLTAQ RLHDLGDESK LLPLWRQAEP RFLWNNYMLE 180
  181 VLIDNKLDQF LLPVIQGSFH SFQTAIGRDI VDITLIARRC SRRNGTRMWR RGADPDGYVA 240
  241 NFVETEQIVR MNGYTSSFVQ IRGSMPFMWE QIVDLTYKPK FEIVQPEEAA RIAERHFLDL 300
  301 RKKYGSVLAV DLVNKHGGEG RLSERFAGAM QHITGDDVRY LHFDFHHICG HIHFERLAIL 360
  361 YEQMEDFLEK NGYFLLNEKG EKMKEQLGIV RTNCIDCLDR TNVTQSMIGR KLLELQLKRI 420
  421 GVFGAEETIR SHQNFDECYK ILWANHGDDI SIQYSGTPAL KGDFVRYGQR TIQGVLQDGW 480
  481 NALARYYLNN FADGTKQDAI DLVQGHYIVA VSRDMAPVPR KRGLEAVANF PVALTVILIS 540
  541 FWFATMSVKQ VGSGYKHLLF SLVWAGISVA VAALVRANGR IFCNRPSLHK PRS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle