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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|20809032, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTILAMKSR FKSIQWKIIL LYSLLILVAM EIIWIYLYKS LENYHLNNFD NYLEAQAKGI  60
   61 SFTLKDNMDI KSLKSVINMY MGPNSNIKYV YILDSHGNIL ASSTGDTGKM MTPAIAKALS 120
  121 GEMGSELTKD YYSNSTIKSF AMPIYNSEGK VSGVVYLIGS LKGIYDTLWD VNLILASATL 180
  181 FALIITMILG YILSKTIADP IKEVTKYAQR MAEGDFDIKI NVKSDDEIGK LGEMFNFLSS 240
  241 RLKETLNDIQ GEKNKIEAII KFMKDGVVAA DANGNIIHYN EAAEKMLNKK LSLGMPVEEV 300
  301 LPLKEAENPI PMTCDNRVLM INAASVKINN QVEGYVYVMH DITEQHKLDQ MRKEFVANVS 360
  361 HELRTPLATI KSYVETLLYN DVDTEYSKKF LRIIETETDR MTRLVKDLLL LSKMDSEENS 420
  421 LKLEPCDFNE IVKNVVNSLS IEATKKGHNV ILNLSETLQK VNVDKDKVEQ MAMNIINNAI 480
  481 KYTPEGGVIE ISTAYDEEGV TFTVKDNGIG IPKEDLPRIF ERFYRVDKAR SRELGGTGLG 540
  541 LSIVKQIVEL HKGKVKIESE LGKGTVVTVQ LPYSKNS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle