YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20808837, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKFIVLFSI FLLIFIFSGC SNKNSQPISD TKFALDTYCT LTVYDKVPKK VLDDGFKAIE  60
   61 DIEKKMSVTI EDSEVSEINK NAGIRPVKVS PDTFYVIKKA IHFSEIEKGY FDITVGPIVN 120
  121 LWNIGTDKAR VPSAEEIKAK LPLVNYKNIV LDEKNMTVML KDKGMSIDLG GIAKGYAADK 180
  181 VAEVLKKEGV KHAIINLGGD VLTIGTKPDG TNWRVGIQTP FKPRGEYFGI VEVGEKAVVT 240
  241 SGIYERYFEK DGKLYHHILN PFTGYPADNH LYSVTIITDT SIDGDALAKI FVMGLDEGLK 300
  301 VAENLPGVEA IFVTDDKKVY ITSGLKGNFR ITDPEYTLMT K

Type	Start	End	Confidence
Signal Peptide	1	21	0.98
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	341	0.99