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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|20808757, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDNNKIFRS MVLYLLIFIA IYAMVQLYSQ ATPQVTKIDY GELVRYISAN QIKSITLSGN  60
   61 QVKGVFKNGT EFESSVPDIT NFMSFVDPYI LEGKLDFKYE PQVGPPWWVQ MLPSLFLVGV 120
  121 LILFWYIFMQ QAQGGGGSRV MSFGKSRARM VTDKDKRVTF NDVAGADEEK EELQEIVEFL 180
  181 KYPKKFIELG ARIPKGVLLV GPPGTGKTLL ARAVAGEAGV PFFSISGSDF VEMFVGVGAA 240
  241 RVRDLFEQAK KNAPCIVFID EIDAVGRQRG AGLGGGHDER EQTLNQLLVE MDGFSVNEGI 300
  301 IVIAATNRPD ILDPALLRPG RFDRHIVVNI PDIKGREEIL KVHARNKPLA PDVSLQVIAR 360
  361 RTPGFTGADL ENVMNEAALL AARKGLKQIT MAELEEAITR VVAGPEKRSR IMSEKDKKLV 420
  421 AYHEAGHAVV AKLLPTTPPV HEVTIIPRGR AGGYTMLLPE EDKYYMSKSE MMDEIVHLLG 480
  481 GRAAEKLVLN DISTGAQNDI ERATNIARKM VTEYGMSDRL GPMTFGTKSE EVFLGRDLGR 540
  541 TRNYSEEVAA EIDREIRRII EEAYKRAESL LQENIDKLHR VAKALMEKEK LNGEEFEKVF 600
  601 NGEEIEGVSF A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle