YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20808610, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLALTIAGS DSGGGAGIQA DLKTFSAHGV FGMSVITSIT AQNTMGVLGI EDVSPDMVYL  60
   61 QMRAIFEDLY PDAVKIGMVS NEEIIKTIAK GLKEYGVEKV VLDPVMIAKS GDPLLKPEAM 120
  121 KALKEELLPL SLVVTPNLME AKELTGMEIK NISDMKEAAK KILSLGAKVV LVKGGHLEGE 180
  181 AVDVFYDGVE FYEIKAERIN TKNTHGTGCT FSSAIAANLA LGYDLLEAVK RAKRYITGAI 240
  241 KNSLSIGHGV GPTNHFWNVE FKE

Type	Start	End	Confidence
Signal Peptide	1	20	0.49
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	263	0.97