YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20807888
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARGALTGRQ KSAMLLIALG PELSAEIYKH LREEEIEQLT LEIASIRNLT PEEKQKIIDE  60
   61 FYNMCIAQEY IIEGGIEYAK TVLEKALGAQ EAFEIINKLT SSLKVRPFDF IRRADPSQVL 120
  121 NFIQNEHPQT IAMILSYLKP QQAGAILSSL PEKLQAEVAM RIAKMESTSP EVVKEVERIL 180
  181 ERKLSSLVTQ DYTSSGGIQT IVDILNSVDR STEKNILDTL ETIDIELVEE IKKRMFVFED 240
  241 IVTLDSRSIQ RVLREVDNHD IALALKGASE EVQRVIYSNM SKRLAEMIKE DIQYMGPVRL 300
  301 KDVEEAQQRI VNIIRKLEEA GEIVISRGGG DEIIV

Type	Start	End	Confidence
Signal Peptide	1	25	0.99
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	335	0.99