YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20516383, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLANKLTMS RLFLIPVFMV FMLVKIPYGD FIAASIFAIG ALTDKLDGYI ARKYKQITNF  60
   61 GKFMDPLVDK IMVTSALIAL VQMGRIESWI VIVIIAREFL ITGIRTVAAD KGIVIAASNY 120
  121 GKYKTTSQMI AVIALMLNNY PFSLVNFPFD KIMVYIALIL TIYSGVDYIV KSKDLFKD

Type	Start	End	Confidence
Cytoplasmic	1	11	0.79
Transmembrane Helix	12	29	0.87
Non-Cytoplasmic	30	85	0.71
Transmembrane Helix	86	101	0.65
Cytoplasmic	102	124	0.67
Transmembrane Helix	125	144	0.66
Non-Cytoplasmic	145	151	0.69
Transmembrane Helix	152	170	0.81
Cytoplasmic	171	178	0.85