YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20807156
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLIIKRLID IFVSLFLLII LSPFLVIISL IVFVAMGPPV IYKQTRAGFK GKPFTIYKFR  60
   61 TMTNEKDEYG NLLPDEKRLT KMGKFLRSTS LDELPELFNV LKGDMSLVGP RPLLMEYLNY 120
  121 YTEEQMRRHD VKPGITGWAQ VNGRNSLSWE EKFKLDVWYV DNWSLWLDFK ILFLTLIKVI 180
  181 KREGLSAEGY ATMPKFTGSK D

Type	Start	End	Confidence
Cytoplasmic	1	11	0.86
Transmembrane Helix	12	36	0.90
Non-Cytoplasmic	37	201	0.93