YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20807049
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKIFVVGAG TMGSGIAQVF AENGFEVVVR DIDMKFVERA LGVIESNLKR NVEKGKITEE  60
   61 KKNEVLSRIR GTVDIDEARE ADFVIEAAVE NMEIKKEIFR ELDNVCRKEV ILATNTSSLS 120
  121 ITEIASSTQR PEKVIGMHFF NPVPVMKLVE VIRGMKTSDE TFNTVKELAQ KLGKTPVEVN 180
  181 EAPGFVVNRI LIPMINEAIG VLADGVASAE DIDEAMKLGA NHPIGPLALS DLIGNDVVLA 240
  241 IMEVLYQEFG DPKYRPHPLL KKMVRAGFLG RKTGKGFFEY K

Type	Start	End	Confidence
Signal Peptide	1	21	0.93
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	281	0.99