YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20807043, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRLEDESKP NHERWLLTYS DMITLLLIFF IVMYTMSTLN AAKFAQLAGS LSKTFTGTNY  60
   61 ILGKYSGKSV VPGNAENKDN LGEVQAQLQA FIKESNLQGM VSTYRDERGL VVSLQDTLLF 120
  121 DLGSADVHPE EKEVLIKIGK MLKNLPNYIR VEGFTDDLPI HNQKFDSNWE LSVIRATTVV 180
  181 KILVNEVGIE PQRISAVGYG EYRPIVPNDS EEHRRLNRRV DIVIMNTEYN KWEPKTQ

Type	Start	End	Confidence
Cytoplasmic	1	15	0.90
Transmembrane Helix	16	37	0.88
Non-Cytoplasmic	38	237	0.88