YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20807013, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKKSLFLAF AVVFALAFML SGCGSKFNTV DQIKQKGVIV MGTSADFPPF EFHKVEGGKD  60
   61 EIVGFDIDIA NAIAKKLGVK LEIKDMDFKG LIPALQAGRV DMVIAGMTPT AERKKSVDFS 120
  121 DLYYDSRQVV VVKNDSPISK FDDLKVKTIA VQIGTTSEEA AKKIPNVKLK QLNRVSDEFM 180
  181 DLQNGRCDAI VVEDTVAKAY LKEYKDMKIL YMDEINNVEN GSAVAVAKGN KSLLDVVNEV 240
  241 IKELKQSGEY DKLVDKWFKQ

Type	Start	End	Confidence
Signal Peptide	1	25	0.96
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	260	0.99