YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|19918714, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIISTVLDI LSIISLVIGL LFLCLGMLGL LRLPDVYNRL HATTKVATLG ALGVLLSIII  60
   61 QEGYTPMGVK AFTVAMFILL TAPISGHMIG KAAYSHGVKL CEGTCIDEYG PSRGPQSVSK 120
  121 KKK

Type	Start	End	Confidence
Non-Cytoplasmic	1	9	0.73
Transmembrane Helix	10	31	0.94
Cytoplasmic	32	40	0.75
Transmembrane Helix	41	61	0.89
Non-Cytoplasmic	62	68	0.66
Transmembrane Helix	69	90	0.89
Cytoplasmic	91	123	0.85