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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|19918508, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKELDENKN QICSPQGDEH LISYSEFLQR LGVNENGLSE QEAARRLKEC GPNVLEESGK  60
   61 ESIFKRYIRQ FRNFFSILLT VGALLSFLGE YLDPGEGNLY IGIALIGVVF LNGTFTFVQE 120
  121 YQAAKTMESF RQLLPPHAKV FRDGKVKDIL ASELVVGDVI LLEEGDKVPA DGRLIETNAL 180
  181 KVDNSALTGE SEPQLRSIEC THENMLECRN MVFSGTLVQS GNGKAIVFGT GQDTQIGSLA 240
  241 TLTEQTTSVD TPIRKELNHF IKIISAIAIF LGITFFLLAF FLQDIFLASL IFAIGIIVAN 300
  301 VPEGLLPTVT LALSLASRRM ATRNALIKQL ESVETLGSTT VICTDKTGTL TQNRMAVNSL 360
  361 ILGFESLERE KPSSPQEGGE SGSKELTGNP GWAPEKIPPV FIRVAGLCNN AKLYEAPPGY 420
  421 TGDPTEGALL VFANGFVDVK ALQREYPRQE EFPFDSLTRR MEVVCRTPED KLEVYLKGAP 480
  481 EVVVQMCGSI LESGEIRKLD EAGQKELLGR HLKLAEKGER IIALAFRQAD AQKEYTGDFI 540
  541 FLGFIGIIDP PRPEAREAIA KCHAAGIKVV MITGDHPVTA ESIARDVGLA AFGTPEIITG 600
  601 DELKSLSRTE LASRLKNPSI VFARTSPVQK LKIVQLFQAE GEIVTMTGDG VNDAPAIKNA 660
  661 DMGVAMGSGT DVAREAADMV LLDDNFATIV NAVEEGRTVF DNIKKFIAYI LTSNIPEILP 720
  721 FIAFVLLSIP LPMPVQLILA IDLGTDILPA IALGVEKGEG DIMKRPPRPR DEKLLTSQVL 780
  781 LTSYGVKGPI EAAAGFFCYF AVLFGGGWTY GEQLANNNPI YMQAITAFFS AIIICQIANV 840
  841 FVSRTRFQSV FSMGFFSNRM VLLGIASELL ILALIIWNPV ANLIFNTAPI DFKYMLLAVP 900
  901 FAVFLLGVDE LRKYLLRKNV SWVARFFKW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle