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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|19918507, gi|...
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVSRKILVI IYIIFALLTS VVIFASQNIL DSSFSGLEEK EAIENVESVH NVIDFQIIQL  60
   61 DETSSALVSR EDVRAFMVSE NPKDLGGTLL TDLFTLSGCD FVFFVNSSGT MIYSQVSDSK 120
  121 NASDASSDLI ITEIDQKINE GDLLCRERLS PLSGILLLEN GPVIVSCRPV SAALDNSKMI 180
  181 GTIVLGKKLD SDFVDSIQKI TGNPVLLYGP DNAPPEFEHV FSENGSENFT QLVDVEGDRL 240
  241 AGYFIHRDIN GNPTIMVRTT ADRNIYEEGR KSLRYIVLFL LFSGLMVGAG CKFLLDREVV 300
  301 SRLVAIDSFV DRVGKDEDFS AHCIMEGDDE LSRLTEGINR MLDRLRLNSD KVKAQEHEKK 360
  361 VILNSLSELV IFMDLELKIV WANRASLDYA GLKLENIVGH SYEKLSPISD AVSGRALAQK 420
  421 ALESGNEETG EVVTPDGKIW TIRMNLIKDE DGKVTGFLQT GLDITAHRRS EEKLLQAKLE 480
  481 AEAASCTKSE FLANMSHELR TPLNSIIGFS DILIERVFGE LNEKQLKYVN NISGSGKHLL 540
  541 GLINDILDLS KVEAGKMDLH YSEFTVDSVF EEVKSTLFPL AQAKSLEINF VVGPDFGDIQ 600
  601 ADRSRLIQIL YNLVSNAIKF TPEGGRVSVY CKKSGSRALF SVTDTGIGIS SEDQKKLFQP 660
  661 FTQIDSSSAR QYCGTGLGLA LVKKIVNLHK GDIWVESELE KGSTFMFTIP LTKPPESPKA 720
  721 DTKGIEDVML EFEMSKAAAF SAKECEEALK EELELPEILL PENREAQSLV LVVDDDINSN 780
  781 ELISVVLREA GYSTASLHNG KDVLEVAKKL KPDVITLDVL LPDTSGWNVL KQLKSDLDTT 840
  841 SIPVLIISVT DNNELGVALG ATYSFTKPVR RVELLDSLRE ITGKFSFDEP KVLIIDDDEN 900
  901 AVELLSSMIE SEGFEIVKAY SGQAGLDKLF SEQQPDILIL DLLMPEISGF EIISRLRDGE 960
  961 QTKDIPLIVC TAGEFTEKNI EKLNGELKGH LISIMKKGTF GRKELINRIK QLAMLKRRED1020
 1021 ERNSYCRR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle