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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|20093095, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPIKKIYLI VCSFILLTCS LYASTGFLHV AGAVEDQKDT VGDGEPVAPP SLEEVLAQSP  60
   61 VSVEGLIKKG NDLYSLKKYE LSIECFDDAL EMDSNSSMAC YGKGCALTSL KRYEEAIDCY 120
  121 DKALESFPTS SWSWYQKGDE YIQTQNYVEA INCYEKSFSM DSYLSRVWFQ KALASEKLGM 180
  181 EQEALASYDS SIGLGSNVSK TLQMKGKAYT GLENYDEAMR CFNGALNITP DDFELWTQKG 240
  241 IMYDMSGDYE AAIQCYDEAI SLNPDLTEAW YNKGVDLEGM GLYQEALTCY EFVLLSEPEN 300
  301 LNTLQKKGFC LEQLGRNEEA LQCYEEILTY SPDDADAWYS KGSVLNAMGD YDAAIACYDR 360
  361 ALNPDAGIEV EEIGEALLEK FNAYDSALPG YSEVPEFKSS AVKIWYDKGL AFDKLENYES 420
  421 ALECYDSVLE TESGHAVVWY MKALDLDRLD RYEEAAGCYD KALKLNSEYA KVWYRKGYDS 480
  481 SKFGQYKDAA KSFDKAVNLD DNYTLAWYGK AFALAKTGDY EEALVCYEKV LAAAPDSAEI 540
  541 WYNKGLLLDQ LERHQEASDC YSKALQINPG YSVARFRLNK NTEELYGGLT PNSSEGKKTE 600
  601 VSPKSAISGG FWSYLLNYKY TLTEESSDIS ENFDDLSPEF SYDAAWYGKA SAYSKLNMHE 660
  661 DALDAYDTAL SINPLRTEAW YEKGSALDKL GRSEEALECY KKALEINPQS SDALYGMASI 720
  721 SNTLGRSEEA IAYYDQLLAA NASDPEALQG KSQALVNLGR YEEAVECFNP LLELESENIE 780
  781 ALDGRAFSLT KSGRQEEALE DYDRILQLEP SNSKAMTEKA SLFEELGRYE EAASTYGEIL 840
  841 RITPENREIM YRQGKALEAM GDFEAAIACY DQILALDPKN IDAINNKGFA YAKMEKYQEA 900
  901 IASYDKAIEY APNNATAWYF KGCANFAISS NIAAVESFDK VVTLKPDCIT AWYNRGYLYN 960
  961 VMGEVNESIN SYNSALAINP NEPSVLYNKR FAHYRIKEYE DASACKTKLD SIDPGFVTAL1020
 1021 QNRGTRIFIP ETYRSDLNYS LPVRWYEEEG NYSNNTSINV TETPQQVTNT SSREGQKEH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle