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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|20092875, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYYDREISSV LEELKTSEEG LSSEEAEKRL EEYGKNELKE KEKVSVLRLF LSQFKSILIF  60
   61 ILIVASIVSA LLGETIDSVV ILFTVFLAGV LGFVQEYRAE KAIELLKSLT SPEATVIRNG 120
  121 AEKKIPSTEL IPGDIILLQT GDRIPADARI IKEFNLKVDE SSLTGESVPV QKITDALPAS 180
  181 TSKADRKNMV YAGTSVAYGR GKGVVTATGM KTSFGELAGL LGTIERSRTP LQESLDKFGR 240
  241 WIGGATLVIV AFVAVLGVFS GFPPLDMFLW GVALAVAAIP EALPAVVTVG LGLGVRRMVK 300
  301 RHALVRKLPS VETLGATDVI CSDKTGTLTQ NKMTVEKIYV NKQNLKVTGN GYNPEGKFLK 360
  361 EDSDKEDPEV SEDDLHLRTL LLGAALCNDS NLHKEEDVWK ITGDPTEAAL VVAAAKAGFE 420
  421 NSELERKYPR LAEIPFSSET KRMTTFNKLE DGPGSILDSE LVAFSKGAPE VILASCTKIL 480
  481 LDGETKVLTQ EQIQEISEQV KELADQALRV MALSFRPLEE GFSPEKVTSG EIPAEEIEKD 540
  541 MIFSGLIGMR DPPREEVKAA IKTCEEAGIK TVMITGDHKI TAAAIARELG ILKENDLTLT 600
  601 GSELDNLDEI EFEEKVEKVS VYARVYPTHK LRVVEALKKK GYVVAMTGDG VNDAPALKAA 660
  661 DMGIAMGITG TDVSKEASSM ILTDDNFASI VSAVEEGRNI FKNIKNFIAY GLTAHIGEVL 720
  721 IVLTAILGWQ ILPLIAVQIL WINLITDGLP PMALSVEPPD RGLMRQKPRD VEEGLITRRE 780
  781 IAAGLGIGGL IATQALIVLV WALNSGFPIP KLQTMIFTLV VFSEMFNAFN WRSDRYSIFS 840
  841 LGLFTNKALV YAVLTTVILQ LLVVYTPFLQ FAFRTVPLSL SELGIITALA STTLISMEIV 900
  901 KYLNARKYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle