YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|19917862, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVTGENKVI DTILNRRSVR EFTDRPISKE EINTILNAGR WAPSGLNNQP WRFAVVRNPE  60
   61 TIQKLSECTH YSGIVAGAAL LIAAFLDTEH SYNRTKDIQA IGASIQNMLL ACCGLSLGAV 120
  121 WLGEILNQHE KVNSILGCSS KLELMAVLAI GEPAPGKRTS TRKALPELVF EEKYGQKWEE 180
  181

Type	Start	End	Confidence
Cytoplasmic	1	67	0.76
Transmembrane Helix	68	86	0.68
Non-Cytoplasmic	87	102	0.66
Transmembrane Helix	103	123	0.76
Cytoplasmic	124	180	0.60