YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20092079, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKQFSIILG IYFLGEFLQK IFGLPVPGNI LGMLILFFGL YSGVIKLEMI DRISDFLLDN  60
   61 LAFFFLPAGV ILITCFAVLE GKLVAVIGVS VISTVIILGV TGLTVEFVKK FLQRRSMKEV 120
  121 FSGKGKSKTG NIPEKTLAVK RIQASGRVKI HNKMQTRERK TREVN

Type	Start	End	Confidence
Non-Cytoplasmic	1	20	0.84
Transmembrane Helix	21	45	0.87
Cytoplasmic	46	55	0.89
Transmembrane Helix	56	78	0.90
Non-Cytoplasmic	79	84	0.73
Transmembrane Helix	85	108	0.91
Cytoplasmic	109	165	0.95