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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|19915870, gi|...
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSFTLLIII FYFWSIGRKS ANISRKGWFL IIAGFFLLFA GHLADLYESL RLVGENPVSP  60
   61 LHNIFLKAFL GGPVSYVLIA AGLLKWVSTV ASVEKLKAEV EKRKEMQEKL SRERSMLSGL 120
  121 LNSIPDAVFF KDPEGTYLGC NPVFCEFVKR PTEGVVGKKN PDFYSKEVAS FLNAEDKEIF 180
  181 ETGKAIIRER WATRPDGRKV LLQTVKAPLY DETGNFIGLV GVSRDITERQ RAEDALLKVR 240
  241 IAEDASQAKS EFIATVSHEL KTPLNSIIGF SDLLLEDSSG KLSERQARYI NNISISGKHL 300
  301 LQFIDDILDL SKIEAGKTFL EPENFEFTKI FKDIEKVFRP RVSGKKLSLN FEVDSGIKSF 360
  361 YADKMMFKQI LYNLISNAVK FTPEEGSITV SAAKIGNMVR ICVKDTGIGI SREDMDSFFQ 420
  421 PFKQPDSFFK RRYERTGLGL FLVKRFVEMH GGNIQAESVP GEGSSFIIEL PLKTGNEGIM 480
  481 GVISGNEDKG QFISAVSSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle