YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20090101, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKELIVLLV LLGVFLAIGC AENGSEAVNE TGTPTAETAV PGQESETILV SAAASLTEVF  60
   61 TDMESQFETE NPGVDVNFNF AGSGSLRTQI EGGAPVDVFA SASQSHMDIL AGEGLIENSS 120
  121 REDFAQNSLV LIVPSSSTLN ISGIEDLTSL EVERIAIGNP ETAPVGKYTT QSLTEAGIWD 180
  181 QLEGKTVLAE DVKQVLVYVE RGEVDAGFVY MTDAKTAEPE TIEIVATVPV TTPISYPIAV 240
  241 VSASENKEEA QEFIDFVTGQ EGQEILEEYG FTPESE

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	276	0.99