YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20089631, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.76
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKQDLTYIA IFLVFLITVL LFALRPEDSP SVPESPAGFE TVSVEEARGM IEKDEVFILD  60
   61 VRTPAEFNSS HIEGATLIPV TNSGGSNLSP DQLLEARINE VPRDKKILVY CRTGHRSITA 120
  121 SKILVTAGYS DVYNMEGGIT AWIGAGYPVV S

Type	Start	End	Confidence
Cytoplasmic	1	5	0.62
Transmembrane Helix	6	24	0.72
Non-Cytoplasmic	25	151	0.87