YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|19704600, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.58
Topology Confidence:	0.38
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLALSLVSCT GLEAGNGAYT AGGAAGGAAL GAVAGQVIGK DTKGTLIGAA VGSLLGMGWG  60
   61 AYRDNQEREL KAKLQGTQAQ VRKDGNALVI NLPGGVTFAS DSANITSGFY SALNGIAQSL 120
  121 NNYPETRIQV NGYTDNTGKD AHNQELSQRR ANAVAQYLIA QGVSSNRIVA NGFGSSNPIA 180
  181 SNSTPEGRLQ NRRVEIKILP AQ

Type	Start	End	Confidence
Cytoplasmic	1	15	0.38
Transmembrane Helix	16	35	0.52
Non-Cytoplasmic	36	202	0.57