YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|19713692, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENNINLKTE IGNNQENENQ KLELKIDGIS CQACVAKIER KLSKTNGVGK ALVNISNNMA  60
   61 DIEYNEKEIK ASEIMKIIEK LGYTPKRRED LKDKEEALRA EKKLKLELTK SKIVIVLSFI 120
  121 LMYISMSHMF GLPLPNILNP EMNIVNYVLT QLILAITVMI IGKRFYKVGF RQLYMLSPNM 180
  181 DSLVAVGTSS AFIYSLYISY KIFAGNNIHL IHSLYYESAA MIIAFVMLGK YLETLSKGKA 240
  241 SAAIKKLVNF QAKKASIIRN GEIIEIDIEE VSKGDTVFIK PGEKIPVDGV IIEGHSTIDE 300
  301 AMITGESIPV EKTENDKVYS GSINKDGALK VTVNATEGET LISKIAKLVE DAQMTKAPIA 360
  361 RLADKVSLIF VPTVIFIAVF AALLWWFLIK YNVISVSQNQ FEFVLTIFIS ILIIACPCSL 420
  421 GLATPTAIMV GTGKGAELGI LIKSGEALEK LNQIDTIVFD KTGTLTEGMP KVIDIVSLGN 480
  481 IDKDEILKIS ASMEVSSEHP LGKAIYDEAK EKNINLYDVK NFLAISGRGV IGEIEAKKYL 540
  541 LGNKKLLLDN NIKDLYEEEI HKYELQGKTT IFLADEEKLI AFITLADVVR NESLELIKKL 600
  601 KKENIKTYIL TGDNERTARV IAEKLGIDDV IAEVSPEDKY KKVKELQEQG KKVAMVGDGI 660
  661 NDSPALAQAD VGIAIGSGTD IAIESADIVL MGKDIKIILT AIRLSRATIK NIKENLFWAF 720
  721 FYNTCGIPIA GGLLYLFTGH LLNPMIAGLA MGMSSVSVVS NALRLKRFK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle