YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18978160, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNKLVVVTG GAGFIGSHIA EALVEENEVI VIDNLYSGKI ENIPQGAKFI EADIRDYSSI  60
   61 AEIIREADYV FHEAAQISVE ESVRDPIFTD EVNVIGTLNI LKALSEGSGK IIFASSAAVY 120
  121 GENKNLPLKE DYLPKPISPY GVSKLAGEHY VRVFYELYGV PGVILRYFNV YGPRQSSAYA 180
  181 GVISIFMKNA LKNEPLVIFG DGKQTRDFIY VKDVVQANLL VAEKERANGK IFNVATGKET 240
  241 SILELALKII DLTSSSSQIL FAPERPGDIK RSVADINEIR KLGFEPSYSL EEGLKETLEW 300
  301 FKKWKYF

Type	Start	End	Confidence
Signal Peptide	1	22	0.95
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	307	0.99