YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18893949, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRAIPVFLL IVLVWISGCI GGGTSTIPTT PSAPETTTIT KTEKVVETVT QTVTVTQTMT  60
   61 PQKYPITIVD SLGREVKIEK EPERIVSLAP SITETLYFIG ALDKVVGVTK FDDFPPDVKE 120
  121 GRTIIGGFSD PNIEVIASLN PDLIIGTSMH MQYLDKLQEI APVIIVDPKN IDEIYEWIIK 180
  181 LGKVVNREEE AVGVVNYMKA IVEDVESKVS NASRPKVFYL LGYWDGYWTT GKGTFIDSLI 240
  241 TMAGGENIFS DIEGWKKVSA EDIVARNPEV IIISYHAGVN PGDLCNTPLA NTDAVKNGRV 300
  301 YVISDDNIIS RPGPRIVLAL QEIAYFIHPE AFNYAYQPKA CARCFFMTFS LFFNEDLLWV 360
  361 EWL

Type	Start	End	Confidence
Signal Peptide	1	21	0.92
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	363	0.99