YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18893923, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRFAVILGL LLIATTLGCI TQSQTSTEST VKEEQKLVIY SYDSFEYLAS EVIPKFEEKY  60
   61 GVKVELQLIG DAGEVLNRLI LEKDNPRADL VIGIDNSLLA KAIEAGVLEP YKPENINLVP 120
  121 ENLIFDPTFH LTPYDYGYIA INYREDMVQN PPKSLEDLTK PEWKGKLVIE DPRTSSPGAA 180
  181 FLLWTIAVYG DDEYLYYWEK LKENDVHIVK GWTEAWTAFM NGEFPLVLSY ATSPAATVYY 240
  241 DNITYVKAIA FEEGNYMQIE GAGIVKGAKN KELAKKFIEF MLTEDFQSAI PTNQWMYPVN 300
  301 PNVELPEVFK YALQPEEIKP VTLDPEYVKE NFERWIKEWT ALMVEGKSPE EIISSRG

Type	Start	End	Confidence
Signal Peptide	1	23	0.95
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	357	0.99