YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18977768, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIYVLGAGA IGSLFGGLLF AAGEDVVLIG RKPHVDAINK RGLRITGIIE EVIKVPATIS  60
   61 PPEEKPDLII LATKSYSTVE ALRASKAIVE DTWILSIQNG IGNEDEIRKF GGKPIGGITT 120
  121 NGAILVSSGV VKWTGKGITV VGLYPKGRHT FVDKISEIFN RAGLETIVSE NIEGWIWAKA 180
  181 IVNSAINPIG TLLRVKNGAI LDNEELLSVA VEVVKEGCKV ATQNGVKLEV HPIDLLFQTL 240
  241 KKTRENYNSM LQDILKGRKT EIDYINGKIV EYAKSVGLEA PLNFLLWGLI KGMEKLHGGV 300
  301 ENVWGKRE

Type	Start	End	Confidence
Signal Peptide	1	21	0.97
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	308	0.99