YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18976799, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.64
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKVGIIMGS DSDLPVMKEA AKVLEEFGVD YEITIVSAHR TPERMYEYAK TARERGIEVI  60
   61 IAGAGGAAHL PGMTASITTL PVIGVPVKSR ALNGLDSLLS IVQMPAGVPV ATVAINNAKN 120
  121 AALLALRILS IKYPEIAEKL EKYKEEMRKT VEEKAKKLEE VGWKEYLGEE

Type	Start	End	Confidence
Cytoplasmic	1	58	0.60
Transmembrane Helix	59	77	0.57
Non-Cytoplasmic	78	170	0.59