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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18312600, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKVAVIGAG TMGHGIAELF AIAGYEVALV DVAEDFLKRA LQNIEWSLKK LAEKGQIKED  60
   61 VGVILGRIKP IVNDVCKAVE GAELMVEAVV EDIEIKRKVF AEADRCAPPS AILATNTSSL 120
  121 PITEIAEAVK PERRPLVVGM HFFNPPVLMP LVEIIKGAYT SDETVKKTAE YASKLGKQTV 180
  181 VVNKDVPGFI VNRILARLNE AACWMVARGE ATIQEVDSAL IYKAGLPMGA FILMDYTGID 240
  241 VVCFIGDAMV KRGFKTHPCP VIAEKCKEKK YGVKSGEGFY KYPAPGKFQW PEVPKAAGDK 300
  301 VDVTYLLAPA INEAAYLLRE SIASREDIDK AIRLGLNWPK GPLEYADELG IDTVVKALEE 360
  361 WKNKTGFEEY EPDPLLRDMA AKGKLGKKSG EGFYTYVKAE EKKLETLIVR YEPGIAWIIL 420
  421 NRPERLNAIN PKMIEELWKV LDEIEQMDYD KVRVVVITGS GRAFSAGADV TGFMGATPVT 480
  481 IFKVSRKLQM LYERLELLDR PVICGLNGYT LGGGLELAMA CDFRIAAETA ELGQPEINLG 540
  541 FIPGAGGTQR LARLIGRDKA KELIFTGDRI PAREAERLGL VHKVVPPDRL EQELRAFANK 600
  601 LAEKPPLALA MAKYAINFGL EAPQWVGMML EASNFGLLFS TEDVIEGVSA FLQKRKPQFK 660
  661 GK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle