YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	B3GTE_ARATH
Protein type:	Transmembrane
Type Confidence:	0.72
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSPRKLFHA RSSLATRRST ALVVLTSLAI GIAGFTFGLA VILIPGLRLT GRNCLTNTPP  60
   61 KTVRVVWDVA GNSNGVVSGE KKRHKVMGFV GIQTGFGSAG RRRSLRKTWM PSDPEGLRRL 120
  121 EESTGLAIRF MIGKTKSEEK MAQLRREIAE YDDFVLLDIE EEYSKLPYKT LAFFKAAYAL 180
  181 YDSEFYVKAD DDIYLRPDRL SLLLAKERSH SQTYLGCLKK GPVFTDPKLK WYEPLSHLLG 240
  241 KEYFLHAYGP IYALSADVVA SLVALKNNSF RMFNNEDVTI GAWMLAMNVN HENHHILCEP 300
  301 ECSPSSVAVW DIPKCSGLCN PEKRMLELHK QESCSKSPTL PSDDE

Type	Start	End	Confidence
Cytoplasmic	1	20	0.70
Transmembrane Helix	21	43	0.70
Non-Cytoplasmic	44	345	0.96