YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ACO2M_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLTASSSAS SSIIRAASSR SSSLFSFRSV LSPSVSSTSP SSLLARRSFG TISPAFRRWS  60
   61 HSFHSKPSPF RFTSQIRAVS PVLDRLQRTF SSMASEHPFK GIFTTLPKPG GGEFGKFYSL 120
  121 PALNDPRVDK LPYSIRILLE SAIRNCDNFQ VTKEDVEKII DWEKTSPKQV EIPFKPARVL 180
  181 LQDFTGVPAV VDLACMRDAM NKLGSDSNKI NPLVPVDLVI DHSVQVDVAR SENAVQANME 240
  241 LEFQRNKERF AFLKWGSTAF QNMLVVPPGS GIVHQVNLEY LGRVVFNTKG LLYPDSVVGT 300
  301 DSHTTMIDGL GVAGWGVGGI EAEATMLGQP MSMVLPGVVG FKLAGKMRNG VTATDLVLTV 360
  361 TQMLRKHGVV GKFVEFYGNG MSGLSLADRA TIANMSPEYG ATMGFFPVDH VTLQYLKLTG 420
  421 RSDETVAMIE AYLRANNMFV DYNEPQQDRV YSSYLELNLD DVEPCISGPK RPHDRVTLKE 480
  481 MKADWHSCLD SKVGFKGFAI PKEAQEKVVN FSFDGQPAEL KHGSVVIAAI TSCTNTSNPS 540
  541 VMLGAGLVAK KACDLGLQVK PWIKTSLAPG SGVVTKYLLK SGLQEYLNEQ GFNIVGYGCT 600
  601 TCIGNSGEIN ESVGAAITEN DIVAAAVLSG NRNFEGRVHP LTRANYLASP PLVVAYALAG 660
  661 TVNIDFETEP IGKGKNGKDV FLRDIWPTTE EIAEVVQSSV LPDMFRATYE SITKGNPMWN 720
  721 KLSVPENTLY SWDPNSTYIH EPPYFKDMTM DPPGPHNVKD AYCLLNFGDS ITTDHISPAG 780
  781 NIQKDSPAAK FLMERGVDRK DFNSYGSRRG NDEIMARGTF ANIRIVNKLM NGEVGPKTVH 840
  841 IPSGEKLSVF DAAMRYKSSG EDTIILAGAE YGSGSSRDWA AKGPMLQGVK AVIAKSFERI 900
  901 HRSNLVGMGI IPLCFKSGED ADTLGLTGHE RYTIHLPTDI SEIRPGQDVT VTTDNGKSFT 960
  961 CTVRFDTEVE LAYFNHGGIL PYVIRNLSKQ 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle