YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17983942, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQPVLALPR HHLDRRFHSC LSVGSPVMSS AHQTHDHAAH GSLKSYLIGF VLAVILTVVP  60
   61 FALAMGGYFT PATTAVIVLA IAAVQILVHL IYFLYLDPKS EGGWNMLALV FTGIILAIVL 120
  121 IGSIWIMYHL DTNMMPMYMT PDNVRNLP

Type	Start	End	Confidence
Cytoplasmic	1	45	0.90
Transmembrane Helix	46	66	0.93
Non-Cytoplasmic	67	73	0.67
Transmembrane Helix	74	96	0.92
Cytoplasmic	97	105	0.82
Transmembrane Helix	106	129	0.93
Non-Cytoplasmic	130	148	0.91