YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17983467, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSRSRFSCF WFTSARWPRW APACSCGRSD NIREERMTDQ GENEKKQRRS NATIAVACLS  60
   61 FFVCMIGAAY ASVPLYRIFC QVTGYGGTTQ RVEQYSDTIL DKTIKVRFDA NIANGLPWDF 120
  121 KPMQREVTVR IGETTMIKYE AHNLFGEETY GRASFNVAPG RAGAYFNKVE CFCFTDNTLK 180
  181 PGEDLELPVV FFVDPEFVND PDLKDVKTIT LSYTFFPIDK PKPVVNAKAV GSTRNGG

Type	Start	End	Confidence
Cytoplasmic	1	51	0.86
Transmembrane Helix	52	73	0.81
Non-Cytoplasmic	74	237	0.99