YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|237815115, gi...
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRAALAVIR SRIGSGDTMS VSSKNETKKS GGLGETISVI VQALLLALII RTLLFQPFSI  60
   61 PSGSMRPTLL EGDYLFVSKY AYGYSRYSLP FGLDLFSGRI WSAEPKRGDV VVFKLPSDTS 120
  121 VDYIKRVIGL PGDRVQMRGG VLYINDKPVK RERVGTINNP DVTEENRPVE VYRETLPNGV 180
  181 TYDTLELAPN SIGDDTRVFE VPAGHYFMMG DNRDNSLDSR FGVGYVPFEN LVGRANIIFF 240
  241 SIADKASPLE IWKWPTDVRF NRLFTWVSGE PHTAVTGN

Type	Start	End	Confidence
Cytoplasmic	1	32	0.80
Transmembrane Helix	33	55	0.75
Non-Cytoplasmic	56	278	0.93