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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|17982240, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSIGPDMNP NYRNFALWAI IALLLIALFN LFQSPGQRTN SREISYSQFI DDVSNGRVKS  60
   61 VTITGQRISG TLADNGSTFQ TYSPGDTGLV SRLEDKGVAI TARPESDGSS SLIGILLSWL 120
  121 PMILILGVWI FFMRQMQGGP RGAMGFGKSK AKLLTEAHGR VTFQDVAGVD EAKQDLEEIV 180
  181 EFLRDPQKFQ RLGGKIPRGV LLVGPPGTGK TLLARSVAGE ANVPFFTISG SDFVEMFVGV 240
  241 GASRVRDMFE QAKKNAPCII FIDEIDAVGR HRGAGLGGGN DEREQTLNQL LVEMDGFEAN 300
  301 ESIILIAATN RPDVLDPALL RPGRFDRQVV VPNPDIVGRE QILKVHVRNV PLAPNVDLKV 360
  361 VARGTPGFSG ADLANLVNEA ALMAARRNKR LVTMQEFEDS KDKIMMGAER RSAMTPEEKT 420
  421 NTAYHEAGHA IVALNVPKAD PVHKATIIPR GRALGMVMQL PEGDRYSATY TWMVSRLAIM 480
  481 MGGRVAEELK FGKENITSGA SSDIQQATKL ARSMVTQWGY SDKLGRVAYG DNQEEVFLGH 540
  541 SVSRTQNISE ETAQIIDAEV RRLIDEAYAE ATRILTKKKK DWIALAEGLL EYETLTGDEI 600
  601 NELIAGNKPS RDQGNDTPSR GSGVPKAGSS RKRKGSEPGG EPGMEPKPQP Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle