YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25524240, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVEARPPWG YRTLLSAINP QRARKREEGK VMKSLLKLSA LIDLVSEALG KVAGYLVLIC  60
   61 CLVSAGNAMV RYALNYSSNG WLEIQWYMFA FIVLIGASYT LRMNEHVRVD IIYGAISPRS 120
  121 RLWVDIIGIV LFLIPACFYL AWLSWPMFTL SWHQGEMSSN AGGLIRWPVK LVIFAGFALL 180
  181 VLQGFSELIK RVGALNGLYA LDTKYEKPLQ

Type	Start	End	Confidence
Cytoplasmic	1	51	0.96
Transmembrane Helix	52	74	0.86
Non-Cytoplasmic	75	83	0.86
Transmembrane Helix	84	101	0.97
Cytoplasmic	102	121	0.93
Transmembrane Helix	122	143	0.96
Non-Cytoplasmic	144	163	0.93
Transmembrane Helix	164	185	0.89
Cytoplasmic	186	210	0.96