YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|159140125, gi...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTVLIVIHL MIVLALVGVV LIQRSEGGGL GIGGGSGFMS ARGTANALTR TTGILAALFF  60
   61 LTSLGLGLMT RYESRPTDIL NRIPATQGQG NGILDTLGPA QTPAAPAPAG NGVPTNSGAA 120
  121 APAQTAPAQA TPAPAASGTA APAPAQPADP NAVPTGQ

Type	Start	End	Confidence
Cytoplasmic	1	4	0.81
Transmembrane Helix	5	25	0.87
Non-Cytoplasmic	26	46	0.75
Transmembrane Helix	47	69	0.87
Cytoplasmic	70	157	0.84