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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|17738876, gi|...
Protein type: Transmembrane
Type Confidence: 0.63
Topology Confidence: 0.38
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHNRLFKSVA GKVVALTIGL ITLSVAAVGF STYIRLKDNI ITTALRDTHG AMRGMAILYE  60
   61 MKVGGVALEM VDGDLKSVGR ASIGTMRDND LVDRTAAGNG GIATVFEAKA GEFIRLTTNL 120
  121 KNEKGERAAG TKLATDHPAF EKVSKGEAYF GTATLFGTSY MTGYMPVTNK TGATVGILFV 180
  181 GVPMDFYNAQ IYSLRDMMVV CGALAMLGVG LLAYFVIKRT LQPLSKLTDA VKSLSDGDLE 240
  241 TPIPYATNTN EFGNIARALV IFRENAIEKL AIEGKSAQER SAAESERHRN DAEKQELDGQ 300
  301 IEFAVGEIAS GLGRLSRGDL SRTIETPFAG RLDRLRTDFN ESLLNLRDAL GQIRERTLII 360
  361 QNSGIEIEQS SVDLSKRTEN QAASLEETAA AVEEITATVR SSAERAREAN EAVRVTKQSA 420
  421 DSSGSVVSNA VDAMSRIEGA SRKIEQIIEV IDDIAFQTNL LALNAGIEAA RAGEAGKGFA 480
  481 VVAQEVRELA QRSADAAREI KQLINQSTHE VSSGSKLVQE AGTVLSAISR QIVTVSQHVE 540
  541 TIATATQDQS SALHNVNGSV NQMDQMTQQN AALAEQSSAA SRVLSGEVEA LLDLVQRFQM 600
  601 EQGSAAGSGR LNRAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle