YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25331180
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSEAHAHHD AHGDDHHHDG ASHGTFKSYM IGFVLSVILT AIPFWLVMGG VLENKTLLVI  60
   61 AIMGLGVIQI FVHMIYFLHM DTRSEGGWTF MALIFTVVVL LITLSGSLWV MYNMNKNMMP 120
  121 LHIEDVKNLP

Type	Start	End	Confidence
Non-Cytoplasmic	1	27	0.54
Transmembrane Helix	28	49	0.91
Cytoplasmic	50	55	0.50
Transmembrane Helix	56	78	0.92
Non-Cytoplasmic	79	87	0.50
Transmembrane Helix	88	112	0.90
Cytoplasmic	113	130	0.55