YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25349730
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAERGPPKQ TISLPVALRK DRDMSEIAPQ NRRIRPAAIV VLFLTIALTG CLLALGTWQV  60
   61 QRLFWKLDLI ERVDVRAHAE PVDAPAASDW PALGNPSDYE YRRVKLTGTL LNDREVQVYT 120
  121 VTDLGPGYWV MTPLRRDDGS SIIVNRGFVP SDRRDPSSRT GGEPTGNVEI VGLMRAPETG 180
  181 GLFLRTNDPA NGRWYSRNIP QITQASGLSD VAPFYVDADA TPNPGGLPVG GKTMLTFPNN 240
  241 HLSYAVTWYI LAAMVVAAGW YVLRNLNAPK SKRDAD

Type	Start	End	Confidence
Cytoplasmic	1	36	0.96
Transmembrane Helix	37	58	0.93
Non-Cytoplasmic	59	243	0.98
Transmembrane Helix	244	263	0.95
Cytoplasmic	264	276	0.92