YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DIVIB_LISMO
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAENKRVISI ENRIPELKKY RKKKLVRHLA ILIGIFVILI AITLYFLSPL SKLDKIAVSG  60
   61 NKQLTENEVR KESGLEIGEF VIGISNGKTE DALKKNTLIK DATVSKEGLN DVQINITEFK 120
  121 TIGYQQQDGK YYDVLESGIM LTDQPRQFPI GNDLLFQNFK NGKTLEKMVD QINKLPKDVV 180
  181 SSISEVIYSP TKSDKNHIKL YMNDGNQVSA DISTFAEKMQ HYPAIVAQLA KGQKGVIDIE 240
  241 VGSYFQSYYQ QNAEKKATEE AAKEKKETNE

Type	Start	End	Confidence
Cytoplasmic	1	24	0.99
Transmembrane Helix	25	47	0.90
Non-Cytoplasmic	48	270	0.99