YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16801206
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAENKRVVSI ENRIPELKKY RKKKLIRHLA ILIGIFAILI LITLYFLSPL SKLDKIAVSG  60
   61 NKQLTENEVR KESGLTAGEF VLGIRNGKTE EKLEKNTLIK NATVSKDGLN DVKINITEYK 120
  121 TIGYQQNDGK YYDVLENGIM LTDQPRQFPI GNDLLFQNFK NGKTLEKMVA QINKLPKDVV 180
  181 NSISEVIYSP TKTDQNHIEL YMNDGNQVSA DISSFADKMQ HYPAIVAQLA KGQKGVIDIE 240
  241 VGSYFQSYYQ QNAEKKAAEE KAAEKKKENE

Type	Start	End	Confidence
Cytoplasmic	1	24	0.99
Transmembrane Helix	25	47	0.90
Non-Cytoplasmic	48	270	0.99