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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16799998
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDWKIKIQT FLSKNYGFFV LAVILYWLKT YIAYQLEFKL GIENLMQQIL LFINPLSGAV  60
   61 FFLGLALFAK GRRSFIWIVV IDFLMSFILY ANIVYYRFFS DFITLPNLNA KQMQNMGDMG 120
  121 SSITALLSWH DIIYFADIII LIALLAFRFV KPDKTARIRA RKVVGVLTLG IAMFFANLGL 180
  181 AEIDRPQLLT RTFDRNYIVK YLGMTNYQIY DAVKSTESST QRALADSSDV TEVLNYTKSK 240
  241 YAAPNPEYFG KAKGKNVIYI HLESFQQFLV NYKLNGEEVT PYINSFFKDK NTLSFTNFFH 300
  301 QTGQGKTADS EMLLENSLYG LPQGSAFTTK GQNTYESASA ILGQQGYTSA VFHGNYKSFW 360
  361 NRDEIYKQFG YDNFFDASYY DMNDADVSNY GLKDKPFFQE SEKYLSSLKQ PFYTKFITLT 420
  421 NHFPYPIDEK DASIAPATTG DSSVDTYFQT ARYLDESVKS FVDYLKKTGL YDNSVIIMYG 480
  481 DHYGISDNHE EAMTKILGKD YNTFENAQAQ RVPLMIHVPG VEGGVQEQYG GQVDLLPTLL 540
  541 HLLGVDNKEY LQFGTDLLSK DHKQLVPFRN GDYITPTYSM IGGNMYNQQT GEPIATETKE 600
  601 MKETKEKVSK ELELSDSVLQ GDLLRFYAPD GFKKVDPSKY NYNKKKSTDS STK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle