YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6960260, gi\|1...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVFIKGYYM SINNPILICV NKKRQIKLAL FYSVVAIALM MSLFLNYSIM LKMVCVFLIL  60
   61 LMIAGASAYW YSAFSGKPQL TLNQEGVTLH TTRLPIVYWH EIDYVGERVS DNTPVLAIFV 120
  121 KDVELYCQRI TNEKMRNNFL SLLNKHESNR VMNISLNDLD YDSDELQDIF KMAVARNLEQ 180
  181

Type	Start	End	Confidence
Cytoplasmic	1	27	0.91
Transmembrane Helix	28	47	0.90
Non-Cytoplasmic	48	52	0.61
Transmembrane Helix	53	73	0.92
Cytoplasmic	74	180	0.91