YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16421613, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRQRRRALT PEQQRRFGQQ AAARMLSFPP VVMAHTVAVF LSFDGELDTQ PLIEQLWRAG  60
   61 KRVYLPVLHP FSPGNLLFLH YYPQSVLVTN RLKIQEPRLD VRDVLPLAKL DVLVTPLVAF 120
  121 DEDGQRLGMG GGFYDRTLQN WQQHKILPVG YAHDCQLVEK LPVKEWDIPL PAVVTPSKIW 180
  181 EW

Type	Start	End	Confidence
Cytoplasmic	1	20	0.92
Transmembrane Helix	21	42	0.89
Non-Cytoplasmic	43	182	0.81