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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: lcl|NC_016856.1_...
Protein type: Globular with Signal Peptide
Type Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQQEYQRRR QALLAQMQPG SAALIFAAPE ATRSADSEYP YRQSSDFWYF TGFNEPEAVL  60
   61 VLIKSDDTHN HSVLFNRVRD LTAEIWFGRR LGQDAAPEKL GVDRALAFSE INQQLFQLLN 120
  121 GLDVVYHAQG EYAYADEIVL AALEKLRKGS RQNLTAPATM TDWRPIVHEM RLFKSPEEIA 180
  181 VLRRAGEISA LAHIRAMEKC RPGMFEYQLE GEIHHEFNRH GARYPSYNTI VGSGENGCIL 240
  241 HYTENESEMR DGDLVLIDAG CEYKGYAGDI TRTFPVNGKF TLAQREIYDI VLESLETSLR 300
  301 LFRPGTSIQE VTGEVVRIMI TGLVKLGILQ GEVDQLIAEN AHRPFFMHGL SHWLGLDVHD 360
  361 VGVYGPDRSR ILEPGMVLTV EPGLYIAPDA DVPEAYRGIG VRIEDDIVIT ETGNENLTAG 420
  421 VVKKADDIEA LMAAARQQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle